As far as using the Tracking Programs to Update the Offline / Online Status for the Signatures and Avatars, that is still able to be done. Granted it will not be Instant since the information is coming from another source, but it does still in fact work.
As for Badge Tracking and such, unfortunately we are not expecting anything from Monday until the Re-write to carry over. Meaning that all you've accomplished within the past week or so will have to be caught up on once we are done with the CIT/CGT re-write. I'm am sorry.